| 1 | import * as omics from "@distilled.cloud/aws/omics"; |
| 2 | import * as Effect from "effect/Effect"; |
| 3 | import * as Binding from "../../Binding.ts"; |
| 4 | import type { AnnotationStore } from "./AnnotationStore.ts"; |
| 5 | |
| 6 | export interface StartAnnotationImportJobRequest extends Omit< |
| 7 | omics.StartAnnotationImportRequest, |
| 8 | "destinationName" |
| 9 | > {} |
| 10 | |
| 11 | /** |
| 12 | * Runtime binding for `omics:StartAnnotationImportJob`. |
| 13 | * |
| 14 | * Bind this operation to an `AnnotationStore` to get a callable that starts a |
| 15 | * job importing annotation files (TSV/VCF/GFF) into the store — the store name |
| 16 | * is injected automatically as `destinationName` and the action is granted on |
| 17 | * the bound resource (with `iam:PassRole` for the HealthOmics service role). |
| 18 | * Provide the implementation with |
| 19 | * `Effect.provide(AWS.Omics.StartAnnotationImportJobHttp)`. |
| 20 | * ### Annotation Imports |
| 21 | * **Example:** Bind StartAnnotationImportJob to an AnnotationStore |
| 22 | * ```typescript |
| 23 | * // init |
| 24 | * const startImport = yield* AWS.Omics.StartAnnotationImportJob(store); |
| 25 | * // runtime |
| 26 | * const result = yield* startImport({ |
| 27 | * roleArn, |
| 28 | * items: [{ source: "s3://my-bucket/annotations.tsv" }], |
| 29 | * }); |
| 30 | * ``` |
| 31 | * |
| 32 | * @binding |
| 33 | */ |
| 34 | export interface StartAnnotationImportJob extends Binding.Service< |
| 35 | StartAnnotationImportJob, |
| 36 | "AWS.Omics.StartAnnotationImportJob", |
| 37 | ( |
| 38 | store: AnnotationStore, |
| 39 | ) => Effect.Effect< |
| 40 | ( |
| 41 | request: StartAnnotationImportJobRequest, |
| 42 | ) => Effect.Effect< |
| 43 | omics.StartAnnotationImportResponse, |
| 44 | omics.StartAnnotationImportJobError |
| 45 | > |
| 46 | > |
| 47 | > {} |
| 48 | |
| 49 | export const StartAnnotationImportJob = |
| 50 | Binding.Service<StartAnnotationImportJob>( |
| 51 | "AWS.Omics.StartAnnotationImportJob", |
| 52 | ); |